Search Primers
Please contact Sarah Romac for further information. Click on the eppendorf for full details.
Primer Name |
Target group | Primer 5'-3' | Sense 5'-3' | Remark | |
|---|---|---|---|---|---|
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X3NDf | ? | GAGGGMAAGYCTGGTGCCAGCAGCCG | Forward | coupled with 1256R |
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TAReuk_R | Eukaryotes | ACTTTCGTTCTTGATYRA | Reverse | |
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TAReuk_F1 | Eukaryotes | CCAGCASCYGCGGTAATTCC | Forward | coupled with TAReuk_R |
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S19F | Foraminifera | GTACRAGGCATTCCTRGTT | Reverse | |
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S17 | Foraminifera | CGGTCACGTTCGTTGC | Reverse | |
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S14F3 | Foraminifera | ACGCAMGTGTGAAACTTG | Forward | coupled with S17 |
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S14F1 | Foraminifera | AAGGGCACCACAAGAACGC | Forward | coupled with S19f |
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PRYM03+3 | Haptophyta | GTAAATTGCCCGAATCCTG | Forward | coupled with HaptoR1 |
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PRYM01+7 | Haptophyta | GATCAGTGAAAACATCCCTGG | Reverse | |
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preV4-noMID | Endomyxa | GYTGCAGTTAAAAAGCTCGTAGTTG | coupled with 1256R | |
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PP952F | Photosynthetic Euk | GCACAAGCGGTGGAGYATG | Forward | coupled with OXY1313R |
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PP936R | Photosynthetic Euk | CCTTTGAGTTTCAYYCTTGC | Reverse | |
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PLA491F | Photosynthetic Euk | GAGGAATAAGCATCGGCTAA | Forward | coupled with PP936R |
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PELA03F | Pelagophyceae | ATCACCTTGGTCGGCAG | Forward | |
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OXY1313R | Photosynthetic Euk | CTTCAYGYAGGCGAGTTGCAGC | Reverse | |
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M4_5.8S_R | MAST-4 | GTTGCGAGAACCTAGAC | Reverse | coupled with M4_18S-F |
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M4_18S-F | MAST-4 | TGGGTAATCTTTGAACGTGAAT | Forward | coupled with M4_18S-F |
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Lhapto9_3 | Haptophyta | CGGGYTGCTYGGGATTGCAGCTTG | Forward | coupled with Lhapto23R_high (LSU2 set) |
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LHapto8 | Haptophyta | GGTATCGGAGAAGGTGAGAATCCT | Forward | coupled with Lhapto20R_bis (LSU1 set) |
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Lhapto4_high | Haptophyta | TAATGGCGAATGAAGCGGGC | Forward | coupled with Leuk10R (LSU4 set) |
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Lhapto23R_high | Haptophyta | ATAGTTCACCATCTTTCGGGTCCCG | Reverse | |
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Lhapto20R_bis | Haptophyta | TCAGACTCCTTGGTCCGTGTTTCT | Reverse | |
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Leuk20r_high | Haptophyta | CTCCTTGGTCCGTGTTTCTAGACG | Reverse | coupled with Lhapto4_high (LSU3 set) |
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Leuk10R | Haptophyta | CAAAGTTCTTTGCATCTTTCC | Reverse | |
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LCO1490 | Amoebozoa | GGTCAACAAATCATAAAGATATTGG | Forward | coupled with HCO2198 |
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LAc_R | Acantharea | TCACCATCTTTCGGGTCCCAACA | Reverse | |
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LAc_F | Acantharea | AAAAGTACGTGAAATCGTTAG | Forward | coupled with Lac_R |
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HCO2198 | Amoebozoa | TAAACTTCAGGGTGACCAAAAAAT | Reverse | |
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HaptoR1 | Haptophyta | CGAAACCAACAAAATAGCAC | Reverse | |
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EndoR1 | Endomyxa | CGACTTCTCCTTCCTCTAARYRDTAWG | Reverse | coupled with 1259-M19, 1259-W08,1259-T19,1259-C16,1259-G12,1259-C17, and 1259-W15 |
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cox3R6Iso | Noelaerhabdaceae | GTCAAATATTACGGATTTC | Reverse | |
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cox3R3Iso | Noelaerhabdaceae | CCTTCTCTAGTAATGTCACGTC | Reverse | |
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cox3F1Iso | Noelaerhabdaceae | TCCTACACTTGGATATTTAG | Forward | coupled with cox3R3Iso(Isocox3a set) or cox3R6Iso (Isocox3b set) |
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Cil_F | Ciliates | TGGTAGTGTATTGGACWACCA | Forward | coupled with TAReuk_R |
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CHR03R | Chrysophyceae | TTAGCAGGCGGGGGTCTC | Reverse | |
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CHR02R | Chrysophyceae | AATCATCTTCGATCCCCT | Reverse | |
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CHR01F | Chrysophyceae | CAATAGCGTATACTAAAG | Forward | coupled with CHR02R, or CHR03R |
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AcanthR1 | Acanthomoeba | TTCACGGTAWACGATCTGG | Reverse | |
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AcanthF1 | Acanthomoeba | TTCCAGCTCCAATAGCGTAT | Forward | coupled with AcanthR1 |
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528Flong | Haptophyta | GCGGTAATTCCAGCTCCAA | Forward | coupled with PRYM01+7 |
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5.8S | Pelagophyceae | CGCTGCGTTCTTCATCG | Reverse | coupled with PELA03F |
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1510R (V9-Icomm) | Eukaryotes | CCTTCYGCAGGTTCACCTAC | Reverse | |
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1389F (V9-Icomm) | Eukaryotes | TTGTACACACCGCCC | Forward | coupled with 1510R (V9-Icomm) |
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1259-W15 | Endomyxa | AGGATTGACAGATTWAAGATC | Forward | |
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1259-W08 | Endomyxa | AGGATTGWCAGATTGAAGATC | Forward | |
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1259-T19 | Endomyxa | AGGATTGACAGRTTGAAGTTC | Forward | |
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1259-M19 | Endomyxa | AGGATTGACAGATTGAAGMTC | Forward | |
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1259-G12 | Endomyxa | AGGATTGACAGGTTGAAGAYC | Forward | |
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1259-C17 | Endomyxa | AGGATTGACRGATTGACGATC | Forward | |
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1259-C16 | Endomyxa | AGGATTGACAGATTKCAGATC | Forward | |
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1256R | ? | GCACCACCACCCAYAGAATCAAGAAAGAWCTTC | Reverse |
